The World of Nano-Biomechanics, Second Edition, focuses on the remarkable progress in the application of force spectroscopy to molecular and cellular biology that has occurred since the book's first edition in 2008. The initial excitement of seeing and touching a single molecule of protein/DNA is now culminating in the development of various ways to manipulate molecules and cells almost at our fingertips, enabling live cell operations.
Single-Molecular Interaction Forces Cross, B., Ronzon, F., Roux, B., and Rieu, J. P. (2005), Measurement of the anchorage force between GPI-anchored alkaline phosphatase and supported membranes by AFM force spectroscopy, Langmuir, 21, 51495153. Rieu, J. P., Ronzon, F., Place, C., Dekkiche, F., Cross, B., and Roux, B. (2004), Insertion of GPI-anchored alkaline phosphatase into supported membranes: a combined AFM and uorescence microscopy study, Acta Biochim. Pol., 51, 189197. Desmeules, P., Grandbois, M., Bondarenko, V. A., Yamazaki, A., and Salesse, C. (2002), Measurement of membrane binding between recoverin, a calcium-myristoyl switch protein, and lipid bilayers by AFM-based force spectroscopy, Biophys. J., 82, 33433350. Bell, G. I. (1978), Models for the specic adhesion of cells to cells, Science, 200, 618627.
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Evans, E., Berk, D., and Leung, A. (1991), Detachment of agglutinin-bonded red blood cells. I. Forces to rupture molecular-point attachments, Biophys. J., 59, 838848. Afrin, R. and Ikai, A. (2006), Force proles of protein pulling with or without cytoskeletal links studied by AFM, Biochem. Biophys. Res. Commun., 348, 238244. Gad, M. and Ikai, A. (1995), Method for immobilizing microbial cells on gel surface for dynamic AFM studies, Biophys. J., 69, 22262233. Kim, H., Arakawa, H., Osada, T., and Ikai, A. (2003), Quantication of cell adhesion force with AFM: distribution of vitronectin receptors on a living MC3T3-E1 cell, Ultramicroscopy, 97, 359363. Afrin, R., Arakawa, H., Osada, T., and Ikai, A. (2003), Extraction of membrane proteins from a living cell surface using the atomic force microscope and covalent crosslinkers, Cell Biochem. Biophys., 39, 101117.
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Afrin, R., Yamada, T., and Ikai, A. (2004), Analysis of force curves obtained on the live cell membrane using chemically modied AFM probes, Ultramicroscopy, 100, 187195. Butt, H. J. and Franz, V. (2002), Rupture of molecular thin lms observed in atomic force microscopy. I. Theory, Phys. Rev. E., 66, 03160110316019. Bibliography Franz, V., Loi, S., Muller, H., Bamberg, E., and Butt, H. J. (2002), Tip, penetration through lipid bilayers in atomic force microscopy, Colloids Surf. B. Biointerf., 23, 191200. Kunneke, S., Kruger, D., and Janshoff, A. (2004), Scrutiny lipid membranes as a function of headof groups, chain length, and lamellarity measured by scanning force microscopy, Biophys. J., 86, 15451553. the failure of Uehara, H. (2007) Detection of mRNA in single cells using AFM nanoprobes. Ph.D. thesis. Tokyo Inst. of Technology. 125 This page intentionally left blank C H A P T E R S E V E N
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Single-molecule DNA and RNA Mechanics Contents Stretching of Double-stranded DNA 7.1 7.2 Hybridization and Mechanical Force 7.3 7.4 DNAprotein Interaction 7.5 Bibliography Chain Dynamics and Transition of DNA and RNA Prospect for Sequence Analysis 7.1 Stretching of Double-stranded DNA
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